Rasko, David : rechercher sur Z-Library

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1

Hybrid error correction and de novo assembly of single-molecule sequencing reads

Koren, Sergey, Schatz, Michael C, Walenz, Brian P, Martin, Jeffrey, Howard, Jason T, Ganapathy, Ganeshkumar, Wang, Zhong, Rasko, David A, McCombie, W Richard, Jarvis, Erich D, Phillippy, Adam M

Journal:

Nature Biotechnology

Année:

2012

Langue:

english

Fichier:

PDF, 765 KB

english, 2012

2

Whole-Genome Sequencing of Multidrug-Resistant Campylobacter fetus subsp. fetus NWU_ED24, Isolated from a Bovine Sheath Wash Sample

Tshipamba, Mpinda Edoaurd, Alayande, Kazeem Adekunle, Lubanza, Ngoma, Mwanza, Mulunda, Rasko, David

Journal:

Microbiology Resource Announcements

Année:

2020

Fichier:

PDF, 132 KB

2020

3

Genomics of the Bacillus cereus group of organisms

David A. Rasko, Michael R. Altherr, Cliff S. Han, Jacques Ravel

Journal:

FEMS Microbiology Reviews

Année:

2005

Langue:

english

Fichier:

PDF, 830 KB

english, 2005

4

Development of novel plasmid vectors and a promoter trap system in Francisella tularensis compatible with the pFLN10 based plasmids

David A. Rasko, Carlos D. Esteban, Vanessa Sperandio

Journal:

Année:

2007

Langue:

english

Fichier:

PDF, 498 KB

english, 2007

5

Bacterial genome sequencing in the clinic: bioinformatic challenges and solutions

Fricke, W. Florian, Rasko, David A.

Journal:

Nature Reviews Genetics

Année:

2013

Langue:

english

Fichier:

PDF, 286 KB

english, 2013

6

Exploiting the explosion of information associated with whole genome sequencing to tackle Shiga toxin-producing Escherichia coli (STEC) in global food production systems

Franz, Eelco, Delaquis, Pascal, Morabito, Stefano, Beutin, Lothar, Gobius, Kari, Rasko, David A., Bono, Jim, French, Nigel, Osek, Jacek, Lindstedt, Bjørn-Arne, Muniesa, Maite, Manning, Shannon, LeJeun

Journal:

International Journal of Food Microbiology

Année:

2014

Langue:

english

Fichier:

PDF, 1.14 MB

english, 2014

7

The Synthesis of OspD3 (ShET2) in Shigella flexneri is Independent of OspC1

Faherty, Christina S., Wu, Tao, Morris, Carolyn R., Grassel, Christen L., Rasko, David A., Harper, Jill M., Shea-Donohue, Terez, Fasano, Alessio, Barry, Eileen M.

Journal:

Année:

2016

Langue:

english

Fichier:

PDF, 1.17 MB

english, 2016

8

The “Crumple Zone” hypothesis: Association of frontal sinus volume and cerebral injury after craniofacial trauma

Cai, Stephen S., Mossop, Corey, Diaconu, Silviu C., Hersh, David S., AlFadil, Sara, Rasko, Yvonne M., Christy, Michael R., Granta, Michael P., Nam, Arthur J.

Journal:

Journal of Cranio-Maxillofacial Surgery

Année:

2017

Langue:

english

Fichier:

PDF, 748 KB

english, 2017

9

Targeted enrichment outperforms other enrichment techniques and enables more multi-species RNA-Seq analyses

Chung, Matthew, Teigen, Laura, Liu, Hong, Libro, Silvia, Shetty, Amol, Kumar, Nikhil, Zhao, Xuechu, Bromley, Robin E., Tallon, Luke J., Sadzewicz, Lisa, Fraser, Claire M., Rasko, David A., Filler, Sco

Journal:

Scientific Reports

Année:

2018

Langue:

english

Fichier:

PDF, 2.20 MB

english, 2018

10

Draft Genome Sequence of Streptomyces sp. Strain NL15-2K, a Degrader of Lignin-Derived Aromatic Compounds, Isolated from Forest Soil

Nishimura, Motohiro, Kawakami, Susumu, Otsuka, Hideaki, Rasko, David

Journal:

Microbiology Resource Announcements

Année:

2019

Fichier:

PDF, 128 KB

2019

11

Cumulative acquisition of pathogenicity islands has shaped virulence potential and contributed to the emergence of LEE-negative Shiga toxin-producing Escherichia coli strains

Montero, David Arturo, Canto, Felipe Del, Velasco, Juliana, Colello, Rocío, Padola, Nora Lia, Salazar, Juan Carlos, Martin, Carla San, Oñate, Angel, Blanco, Jorge, Rasko, David A., Contreras, Carmen,

Journal:

Emerging Microbes & Infections

Année:

2019

Langue:

english

Fichier:

PDF, 3.11 MB

english, 2019

12

Genetic changes associated with the temporal shift in invasive non-typhoidal Salmonella serovars in Bamako Mali

Bornstein, Kristin, Tennant, Sharon M., Hazen, Tracy H., Sorkin, John D., Tapia, Milagritos D., Sow, Samba O., Onwuchekwa, Uma, Levine, Myron M., Rasko, David A., Darton, Thomas C.

Journal:

PLoS Neglected Tropical Diseases

Année:

2019

Langue:

english

Fichier:

PDF, 2.69 MB

english, 2019

13

Draft Genome Sequences of Lactobacillus helveticus , Lactobacillus fermentum , and Lactobacillus delbrueckii Strains from African Fermented Nono

Cho, Gyu-Sung, Fagbemigun, Olakunle, Brinks, Erik, Adewumi, Gbenga A., Oguntoyinbo, Folarin A., Franz, Charles M. A. P., Rasko, David

Journal:

Microbiology Resource Announcements

Année:

2020

Fichier:

PDF, 130 KB

2020

14

Complete Genome Sequence of Pandoraea pnomenusa TF-18, a Multidrug-Resistant Organism Isolated from the Rhizosphere of Rice ( Oryza sativa L. subsp. japonica )

Mangalea, Mihnea R., Luna, Emily K., Ziegle, Janet, Chang, Christine, Bosco-Lauth, Angela M., Bowen, Richard A., Leach, Jan E., Borlee, Bradley R., Rasko, David

Journal:

Microbiology Resource Announcements

Année:

2020

Fichier:

PDF, 134 KB

2020

15

Draft Genome Sequence of Saccharibacillus sp. Strain WB 17, Isolated from Wheat Phyllosphere

Besaury, Ludovic, Remond, Caroline, Rasko, David

Journal:

Microbiology Resource Announcements

Année:

2020

Fichier:

PDF, 111 KB

2020

16

Profound thrombocytopenia related to G-CSF

Jason C. Kovacic, Peter Macdonald, Judith Freund, John E.J. Rasko, Roger Allan, Vivian B. Fernandes, David Ma, John Moore, Robert M. Graham

Journal:

American Journal of Hematology

Année:

2007

Langue:

english

Fichier:

PDF, 71 KB

english, 2007

17

Molecular mechanisms of enterotoxigenic Escherichia coli infection

James M. Fleckenstein, Philip R. Hardwidge, George P. Munson, David A. Rasko, Halvor Sommerfelt, Hans Steinsland

Journal:

Microbes and Infection

Année:

2010

Langue:

english

Fichier:

PDF, 470 KB

english, 2010

18

Genomics of the Bacillus cereus group of organisms

David A. Rasko, Michael R. Altherr, Cliff S. Han, Jacques Ravel

Journal:

FEMS Microbiology Reviews

Année:

2005

Langue:

english

Fichier:

PDF, 830 KB

english, 2005

19

Glucosylated N-acetyllactosamine O-antigen chain in the lipopolysaccharide from Helicobacter Pylori strain UA861

Mario A. Monteiro, David Rasko, Diane E. Taylor, Malcolm B. Perry

Journal:

Carbohydrate Polymers

Année:

1997

Langue:

english

Fichier:

PDF, 308 KB

english, 1997

20

Molecular genetic basis for the variable expression of Lewis Y antigen in Helicobacter pylori : analysis of the α(1,2) fucosyltransferase gene

Ge Wang, David A. Rasko, Richard Sherburne, Diane E. Taylor

Journal:

Molecular Microbiology

Année:

1999

Langue:

english

Fichier:

PDF, 591 KB

english, 1999

21

Lewis antigens in Helicobacter pylori: biosynthesis and phase variation

Ge Wang, Zhongming Ge, David A. Rasko, Diane E. Taylor

Journal:

Molecular Microbiology

Année:

2000

Langue:

english

Fichier:

PDF, 320 KB

english, 2000

22

Lipopolysaccharide structures of Helicobacter pylori genomic strains 26695 and J99, mouse model H. pylori Sydney strain, H. pylori P466 carrying sialyl Lewis X, and H. pylori UA915 expressing Lewis B : Classification of H. pylori lipopolysaccharides into glycotype families

Mario A. Monteiro, Ben J. Appelmelk, David A. Rasko, Anthony P. Moran, Sean O. Hynes, Leann L. MacLean, Ken H. Chan, Frank St Michael, Susan M. Logan, Jani O'Rourke, Adrian Lee, Diane E. Taylor, Malco

Journal:

Année:

2000

Langue:

english

Fichier:

PDF, 1.42 MB

english, 2000

23

Synthesis of mono- and di-fucosylated type I Lewis blood group antigens by Helicobacter pylori

David A. Rasko, Ge Wang, Mario A. Monteiro, Monica M. Palcic,

Journal:

Année:

2000

Langue:

english

Fichier:

PDF, 642 KB

english, 2000

24

Genomic comparison of multi-drug resistant invasive and colonizingAcinetobacter baumanniiisolated from diverse human body sites reveals genomic plasticity

Jason W Sahl, J Kristie Johnson, Anthony D Harris, Adam M Phillippy, William W Hsiao, Kerri A Thom, David A Rasko

Journal:

Année:

2011

Langue:

english

Fichier:

PDF, 977 KB

english, 2011

25

The LysR-type regulator QseA regulates both characterized and putative virulence genes in enterohaemorrhagic Escherichia coli O157:H7

Melissa M. Kendall, David A. Rasko, Vanessa Sperandio

Journal:

Molecular Microbiology

Année:

2010

Langue:

english

Fichier:

PDF, 1.11 MB

english, 2010

26

Anti-virulence strategies to combat bacteria-mediated disease

Rasko, David A., Sperandio, Vanessa

Journal:

Nature Reviews Drug Discovery

Année:

2010

Langue:

english

Fichier:

PDF, 511 KB

english, 2010

27

The Role of Genomics in the Identification, Prediction, and Prevention of Biological Threats

Fricke, W. Florian, Rasko, David A., Ravel, Jacques

Journal:

Année:

2009

Langue:

english

Fichier:

PDF, 99 KB

english, 2009

28

New patterns of bulk DNA repair in ultraviolet irradiated mouse embryo carcinoma cells following differentiation

Istvan Rasko, Milka Georgieva, Gabriella Farkas, Miklos Santha, Julia Coates, Kornel Burg, David L. Mitchell, Robert T. Johnson

Journal:

Somatic Cell and Molecular Genetics

Année:

1993

Langue:

english

Fichier:

PDF, 1.00 MB

english, 1993

29

Visualization of comparative genomic analyses by BLAST score ratio

David A Rasko, Garry SA Myers, Jacques Ravel

Journal:

BMC Bioinformatics

Année:

2005

Langue:

english

Fichier:

PDF, 897 KB

english, 2005

30

Shigella flexneri effectors OspE1 and OspE2 mediate induced adherence to the colonic epithelium following bile salts exposure

Christina S. Faherty, Julia C. Redman, David A. Rasko, Eileen M. Barry, James P. Nataro

Journal:

Molecular Microbiology

Année:

2012

Langue:

english

Fichier:

PDF, 796 KB

english, 2012

31

Patients with Acinetobacter baumannii bloodstream infections are colonized in the gastrointestinal tract with identical strains

Kerri A. Thom, William W.L. Hsiao, Anthony D. Harris, O. Colin Stine, David A. Rasko, J. Kristie Johnson

Journal:

American Journal of Infection Control

Année:

2010

Langue:

english

Fichier:

PDF, 184 KB

english, 2010

32

Effect of diabetes mellitus on biomechanical parameters of the cornea

Yakov Goldich, Yaniv Barkana, Yariv Gerber, Adi Rasko, Yair Morad, Morris Harstein, Isaac Avni, David Zadok

Journal:

Journal of Cataract & Refractive Surgery

Année:

2009

Langue:

english

Fichier:

PDF, 194 KB

english, 2009

33

Bugs N the 'hood

David A. Rasko, Claire M. Fraser

Journal:

Trends in Microbiology

Année:

2004

Langue:

english

Fichier:

PDF, 207 KB

english, 2004

34

Investigating the genome diversity of B. cereus and evolutionary aspects of B. anthracis emergence

Leka Papazisi, David A. Rasko, Shashikala Ratnayake, Geoff R. Bock, Brian G. Remortel, Lakshmi Appalla, Jia Liu, Tatiana Dracheva, John C. Braisted, Shamira Shallom, Behnam Jarrahi, Erik Snesrud, Susi

Journal:

Année:

2011

Langue:

english

Fichier:

PDF, 1.20 MB

english, 2011

35

Mouse cardiac troponin I model of hypertrophic cardiomyopathy: Phenotype associated with abnormal calcium handling

Tatiana Tsoutsman*, Jessica Chung, Alessandra Doolan, Lan Nguyen, Iwan A. Williams, Emily Tu, Lien Lam, Charles G. Bailey, John E.J. Rasko, David G. Allen, Christopher Semsarian

Journal:

Journal of Molecular and Cellular Cardiology

Année:

2006

Langue:

english

Fichier:

PDF, 54 KB

english, 2006

36

Molecular insights from a novel cardiac troponin I mouse model of familial hypertrophic cardiomyopathy

Tatiana Tsoutsman, Jessica Chung, Alessandra Doolan, Lan Nguyen, Iwan A. Williams, Emily Tu, Lien Lam, Charles G. Bailey, John E.J. Rasko, David G. Allen, Christopher Semsarian

Journal:

Journal of Molecular and Cellular Cardiology

Année:

2006

Langue:

english

Fichier:

PDF, 517 KB

english, 2006

37

Lack of correlation between Lewis antigen expression by Helicobacter pylori and gastric epithelial cells in infected patients

Diane E. Taylor, David A. Rasko, Richard Sherburne, Clinton Ho, Laurence D. Jewell

Journal:

Gastroenterology

Année:

1998

Langue:

english

Fichier:

PDF, 591 KB

english, 1998

38

Major Structural Differences and Novel Potential Virulence Mechanisms from the Genomes of Multiple Campylobacter Species

Fouts, Derrick E., Mongodin, Emmanuel F., Mandrell, Robert E., Miller, William G., Rasko, David A., Ravel, Jacques, Brinkac, Lauren M., DeBoy, Robert T., Parker, Craig T., Daugherty, Sean C., Dodson,

Journal:

Année:

2005

Langue:

english

Fichier:

PDF, 544 KB

english, 2005

39

The Human Microbiome: From Symbiosis to Pathogenesis

Eloe-Fadrosh, Emiley A., Rasko, David A.

Journal:

Annual Review of Medicine

Année:

2013

Langue:

english

Fichier:

PDF, 802 KB

english, 2013

40

The first decade of microbial genomics: what have we learned and where are we going next?

David A Rasko, Emmanuel F Mongodin

Journal:

Année:

2005

Langue:

english

Fichier:

PDF, 52 KB

english, 2005

41

Origins of the E. coli Strain Causing an Outbreak of Hemolytic–Uremic Syndrome in Germany

Rasko, David A., Webster, Dale R., Sahl, Jason W., Bashir, Ali, Boisen, Nadia, Scheutz, Flemming, Paxinos, Ellen E., Sebra, Robert, Chin, Chen-Shan, Iliopoulos, Dimitris, Klammer, Aaron, Peluso, Paul,

Journal:

Boston Medical and Surgical Journal

Année:

2011

Langue:

english

Fichier:

PDF, 915 KB

english, 2011

42

Draft genome sequences of five recent human uropathogenic Escherichia coli isolates

Subashchandrabose, Sargurunathan, Hazen, Tracy H., Rasko, David A., Mobley, Harry L. T.

Journal:

Pathogens and Disease

Année:

2013

Langue:

english

Fichier:

PDF, 1.82 MB

english, 2013

43

Lewis antigen phenotype is altered in Helicobacter pylori isolated from asymptomatic subjects

Rasko, David A., Keelan, Monika, Thomson, Alan B., Taylor, Diane E.

Journal:

Gastroenterology

Année:

2000

Langue:

english

Fichier:

PDF, 176 KB

english, 2000

44

SUMO-2 and PIAS1 Modulate Insoluble Mutant Huntingtin Protein Accumulation

O’Rourke, Jacqueline Gire, Gareau, Jaclyn R., Ochaba, Joseph, Song, Wan, Raskó, Tamás, Reverter, David, Lee, John, Monteys, Alex Mas, Pallos, Judit, Mee, Lisa, Vashishtha, Malini, Apostol, Barbara L.,

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 2.26 MB

english, 2013

45

1151 TRANSCRIPTOME OF UROPATHOGENIC ESCHERICHIA COLI DURING HUMAN URINARY TRACT INFECTIONS

Subashchandrabose, Sargurunathan, Brumbaugh, Ariel, Himpsl, Stephanie, Rasko, David, Mobley, Harry

Journal:

The Journal of Urology

Année:

2013

Langue:

english

Fichier:

PDF, 109 KB

english, 2013

46

ZNF265: A Novel Spliceosomal Protein Able to Induce Alternative Splicing

David J. Adams, Louise van der Weyden, Akila Mayeda, Stefan Stamm, Brian J. Morris and John E. J. Rasko

Journal:

The Journal of Cell Biology

Année:

2001

Langue:

english

Fichier:

PDF, 2.62 MB

english, 2001

47

Clostridium difficile healthcare-associated epidemics

Journal:

Nature Genetics

Année:

2012

Langue:

english

Fichier:

PDF, 250 KB

english, 2012

48

Identification of enterotoxigenic Escherichia coli (ETEC) clades with long-term global distribution

von Mentzer, Astrid, Connor, Thomas R, Wieler, Lothar H, Semmler, Torsten, Iguchi, Atsushi, Thomson, Nicholas R, Rasko, David A, Joffre, Enrique, Corander, Jukka, Pickard, Derek, Wiklund, Gudrun, Sven

Journal:

Nature Genetics

Année:

2014

Langue:

english

Fichier:

PDF, 604 KB

english, 2014

49

Helicobacter pylori from asymptomatic hosts expressing heptoglycan but lacking Lewis O-chains: Lewis blood-group O-chains may play a role in Helicobacter pylori induced pathology

Monteiro, Mario A, Michael, Frank St, Rasko, David A, Taylor, Diane E, Conlan, J Wayne, Chan, Ken H, Logan, Susan M, Appelmelk, Ben J, Perry, Malcolm B

Journal:

Biochemistry and Cell Biology

Année:

2001

Fichier:

PDF, 511 KB

2001

50

A divergent Pseudomonas aeruginosa palmitoyltransferase essential for cystic fibrosis-specific lipid A

Thaipisuttikul, Iyarit, Hittle, Lauren E., Chandra, Ramesh, Zangari, Daniel, Dixon, Charneal L., Garrett, Teresa A., Rasko, David A., Dasgupta, Nandini, Moskowitz, Samuel M., Malmström, Lars, Goodlett

Journal:

Molecular Microbiology

Année:

2014

Langue:

english

Fichier:

PDF, 15.36 MB

english, 2014